BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C10LP1|AL427463
(1000 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig912 1260 0.0
>3x_Contig912
Length = 2436
Score = 1260 bits (634), Expect = 0.0
Identities = 640/644 (99%)
Strand = Plus / Minus
Query: 6 aggacttgtttctagctaacctgaagaacagagcgtgatgatatgcaagtgtatatccat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 aggacttgtttctagctaacctgaagaacagagcgtgatgatatgcaagtgtatatccat 594
Query: 66 ataattccagtcattcaacggcaagcttttgcttatcatttggtcattctttcgtttgct 125
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ataattccagccattcaacggcaagcttttgcttatcatttggtcattctttcgtttgct 534
Query: 126 ttcaataatagcaaaaatttcaaaaacattgctttttggtctgaaagccatcgaaaagtg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttcaataatagcaaaaatttcaaaaacattgctttttggtctgaaagccatcgaaaagtg 474
Query: 186 agagaaatgacaaaatgaacttcgatgacgcagccctaaatccttttggacgcataaaac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agagaaatgacaaaatgaacttcgatgacgcagccctaaatccttttggacgcataaaac 414
Query: 246 aatgatatcatgaactaaaatggcactgggtcgaaataagggattaggtttttgggctgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aatgatatcatgaactaaaatggcactgggtcgaaataagggattaggtttttgggctgt 354
Query: 306 gctgcatttgtttcagtcgccgaggatagactctatgaaatagccccactggaagaaggt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gctgcatttgtttcagtcgccgaggatagactctatgaaatagccccactggaagaaggt 294
Query: 366 tctagccccgagctttacaggtaagtttgcatggtcgagaatagtaaggtatcatcacct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tctagccccgagctttacaggtaagtttgcatggtcgagaatagtaaggtatcatcacct 234
Query: 426 cggtgtttgaaaaaggaatattagacgtcacgtgcttggaatatgagaggtttttttttc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cggtgtttgaaaaaggaatattagacgtcacgtgcttggaatatgagaggtttttttttc 174
Query: 486 attattgggctctcagtgactgtcaattaatgaaatatgtatatgamagataagatgaga 545
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 173 attattgggctctcagtgactgtcaattaatgaaatatgtatatgaaagataagatgaga 114
Query: 546 tgagatcatgaaaagaagaagctggcactaattcaacccttccaaggtgtatttatttct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tgagatcatgaaaagaagaagctggcactaattcaacccttccaaggtgtatttatttct 54
Query: 606 tattgtctcaggaaagtggtacattttaamatgcttaamagatt 649
||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 53 tattgtctcaggaaagtggtacattttaaaatgcttaaaagatt 10
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8041
Number of Sequences: 1807
Number of extensions: 8041
Number of successful extensions: 133
Number of sequences better than 1.0e-20: 1
length of query: 1000
length of database: 10,358,551
effective HSP length: 16
effective length of query: 984
effective length of database: 10,329,639
effective search space: 10164364776
effective search space used: 10164364776
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)